Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN3P26045 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN3P26045 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTPN3P26045 SDAD1P2-201ENST00000441308 2028 ntBASIC3.32□□□□□ -1.88
PTPN3P26045 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PTPN3P26045 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN3P26045 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN3P26045 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RNU4-91P-201ENST00000364778 135 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RNU6-637P-201ENST00000384050 107 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 MT-TH-201ENST00000387441 69 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 SNORD115.1-201ENST00000391109 76 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AL021407.1-201ENST00000404531 386 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RNA5SP44-201ENST00000410446 133 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RNA5SP38-201ENST00000410750 119 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RNU6-516P-201ENST00000411381 104 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 RPL17P12-201ENST00000413391 526 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN3P26045 NPM1P11-201ENST00000417106 855 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN3P26045 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC097713.2-201ENST00000430199 356 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 TRIM60P18-201ENST00000441518 828 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 MTND2P4-201ENST00000445034 1004 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 EPS15P1-201ENST00000448836 336 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN3P26045 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN3P26045 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 HMGN1P28-201ENST00000521340 364 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 NCAPGP2-201ENST00000557911 754 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN3P26045 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN3P26045 TPMTP1-201ENST00000592307 737 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC022146.1-201ENST00000595307 847 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN3P26045 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN3P26045 AL157817.1-201ENST00000614264 790 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC026422.1-201ENST00000623961 452 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 AC093591.3-201ENST00000634516 308 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 CU459211.1-201ENST00000635667 749 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PTPN3P26045 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN3P26045 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN3P26045 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
PTPN3P26045 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN3P26045 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN3P26045 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN3P26045 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN3P26045 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN3P26045 MTND4P4-201ENST00000439033 1366 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN3P26045 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PTPN3P26045 RNU6-754P-201ENST00000391166 107 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 RNU6-1197P-201ENST00000391183 107 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 SNORA26.8-201ENST00000391306 124 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN3P26045 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN3P26045 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AC098826.1-201ENST00000433943 471 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AC129850.1-201ENST00000436203 508 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN3P26045 SNRPFP4-201ENST00000456366 242 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC116337.2-201ENST00000477662 156 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 RPL31P60-201ENST00000478450 367 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AP000797.1-201ENST00000478870 387 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 HSPE1P6-201ENST00000479457 291 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 RPL23AP41-201ENST00000484754 458 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AC093534.1-201ENST00000504977 132 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN3P26045 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN3P26045 RNU6-201P-201ENST00000517100 61 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN3P26045 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 MIR4444-1-201ENST00000581696 74 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 ZNF415P1-201ENST00000582279 1166 ntBASIC3.3□□□□□ -1.88
PTPN3P26045 MIR4444-2-201ENST00000584390 74 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms