Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 APOOP4-201ENST00000513530 597 ntBASIC3.29□□□□□ -1.88
CDH3P22223 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC022690.1-201ENST00000526681 550 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH3P22223 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH3P22223 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH3P22223 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH3P22223 AL391156.1-201ENST00000554965 554 ntBASIC3.29□□□□□ -1.88
CDH3P22223 ACTR3BP3-201ENST00000565577 979 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH3P22223 OR4K8P-201ENST00000578842 1048 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC012065.4-201ENST00000602445 679 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH3P22223 AC104010.1-201ENST00000616889 150 ntBASIC3.29□□□□□ -1.88
CDH3P22223 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH3P22223 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDH3P22223 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
CDH3P22223 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 MTND5P33-201ENST00000571250 1450 ntBASIC3.28□□□□□ -1.88
CDH3P22223 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CDH3P22223 SNORD56.3-201ENST00000363507 71 ntBASIC3.28□□□□□ -1.88
CDH3P22223 RNU6-809P-201ENST00000384461 107 ntBASIC3.28□□□□□ -1.88
CDH3P22223 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
CDH3P22223 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH3P22223 SSXP9-201ENST00000417503 292 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AL137014.1-201ENST00000420490 1226 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH3P22223 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH3P22223 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH3P22223 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH3P22223 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH3P22223 AC098826.1-201ENST00000433943 471 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH3P22223 AC108734.1-201ENST00000439549 399 ntBASIC3.28□□□□□ -1.88
CDH3P22223 TAF9P1-201ENST00000445421 515 ntBASIC3.28□□□□□ -1.88
CDH3P22223 COX6CP12-201ENST00000446748 202 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH3P22223 TAF9P2-201ENST00000454958 515 ntBASIC3.28□□□□□ -1.88
CDH3P22223 MTCO1P42-201ENST00000457379 726 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH3P22223 AP000797.1-201ENST00000478870 387 ntBASIC3.28□□□□□ -1.88
CDH3P22223 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
CDH3P22223 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH3P22223 AC116347.2-201ENST00000514912 523 ntBASIC3.28□□□□□ -1.88
CDH3P22223 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC025881.1-201ENST00000518851 512 ntBASIC3.28□□□□□ -1.88
CDH3P22223 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH3P22223 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH3P22223 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH3P22223 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CDH3P22223 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH3P22223 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH3P22223 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH3P22223 MIR4506-201ENST00000584693 77 ntBASIC3.28□□□□□ -1.88
CDH3P22223 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.28□□□□□ -1.88
CDH3P22223 U73023.1-201ENST00000603134 700 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC135507.1-201ENST00000607214 561 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC012360.2-201ENST00000609349 391 ntBASIC3.28□□□□□ -1.88
CDH3P22223 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC022149.2-201ENST00000621061 203 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AL360181.4-201ENST00000621752 134 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AC093591.3-201ENST00000634516 308 ntBASIC3.28□□□□□ -1.88
CDH3P22223 AP003399.1-201ENST00000637534 361 ntBASIC3.28□□□□□ -1.88
CDH3P22223 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH3P22223 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH3P22223 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH3P22223 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDH3P22223 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH3P22223 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH3P22223 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH3P22223 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH3P22223 U3.4-201ENST00000363352 213 ntBASIC3.27□□□□□ -1.89
CDH3P22223 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
CDH3P22223 RNU6-114P-201ENST00000384704 105 ntBASIC3.27□□□□□ -1.89
CDH3P22223 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH3P22223 U3.19-201ENST00000390893 196 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 BEND7P1-201ENST00000422058 457 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH3P22223 USP9YP36-201ENST00000424581 829 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 AC112653.1-201ENST00000443851 386 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH3P22223 RPL31P3-201ENST00000458430 332 ntBASIC3.27□□□□□ -1.89
CDH3P22223 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC116337.2-201ENST00000477662 156 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC245166.1-201ENST00000521012 253 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH3P22223 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH3P22223 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms