Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CD48P09326 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD48P09326 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.29□□□□□ -1.88
CD48P09326 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
CD48P09326 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CD48P09326 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.29□□□□□ -1.88
CD48P09326 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CD48P09326 RNU6-28P-201ENST00000362378 107 ntBASIC3.29□□□□□ -1.88
CD48P09326 U3.11-201ENST00000364476 212 ntBASIC3.29□□□□□ -1.88
CD48P09326 Y_RNA.333-201ENST00000365274 102 ntBASIC3.29□□□□□ -1.88
CD48P09326 SNORD82-201ENST00000365530 70 ntBASIC3.29□□□□□ -1.88
CD48P09326 Y_RNA.516-201ENST00000384541 124 ntBASIC3.29□□□□□ -1.88
CD48P09326 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.29□□□□□ -1.88
CD48P09326 RPS3AP3-201ENST00000411933 242 ntBASIC3.29□□□□□ -1.88
CD48P09326 RPS7P15-201ENST00000415804 584 ntBASIC3.29□□□□□ -1.88
CD48P09326 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.29□□□□□ -1.88
CD48P09326 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 SDCBPP1-201ENST00000440192 890 ntBASIC3.29□□□□□ -1.88
CD48P09326 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.29□□□□□ -1.88
CD48P09326 AC244505.5-201ENST00000443639 207 ntBASIC3.29□□□□□ -1.88
CD48P09326 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.29□□□□□ -1.88
CD48P09326 RPL37P6-202ENST00000464216 403 ntBASIC3.29□□□□□ -1.88
CD48P09326 RN7SL283P-201ENST00000489055 303 ntBASIC3.29□□□□□ -1.88
CD48P09326 HSPD1P15-201ENST00000505573 1122 ntBASIC3.29□□□□□ -1.88
CD48P09326 AF213884.2-201ENST00000510417 903 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.29□□□□□ -1.88
CD48P09326 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.29□□□□□ -1.88
CD48P09326 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
CD48P09326 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC009063.1-201ENST00000563342 702 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC009977.1-201ENST00000586015 570 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.29□□□□□ -1.88
CD48P09326 YWHAQP7-201ENST00000603536 658 ntBASIC3.29□□□□□ -1.88
CD48P09326 AC006566.1-201ENST00000608943 513 ntBASIC3.29□□□□□ -1.88
CD48P09326 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 AC099654.13-201ENST00000639774 207 ntBASIC3.29□□□□□ -1.88
CD48P09326 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD48P09326 ZNF734P-201ENST00000419494 1534 ntBASIC3.29□□□□□ -1.88
CD48P09326 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
CD48P09326 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.28□□□□□ -1.88
CD48P09326 AC005832.2-201ENST00000538921 1430 ntBASIC3.28□□□□□ -1.88
CD48P09326 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.28□□□□□ -1.88
CD48P09326 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
CD48P09326 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CD48P09326 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD48P09326 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD48P09326 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
CD48P09326 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CD48P09326 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
CD48P09326 MTND1P4-201ENST00000435196 415 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC091862.1-201ENST00000438016 1100 ntBASIC3.28□□□□□ -1.88
CD48P09326 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 MTND6P13-201ENST00000443510 523 ntBASIC3.28□□□□□ -1.88
CD48P09326 FAM103A2P-201ENST00000444122 354 ntBASIC3.28□□□□□ -1.88
CD48P09326 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.28□□□□□ -1.88
CD48P09326 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.28□□□□□ -1.88
CD48P09326 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.28□□□□□ -1.88
CD48P09326 snoU13.24-201ENST00000458998 104 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
CD48P09326 AP001025.2-201ENST00000490908 477 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC093278.1-201ENST00000494700 600 ntBASIC3.28□□□□□ -1.88
CD48P09326 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CD48P09326 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
CD48P09326 RNU6-201P-201ENST00000517100 61 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.28□□□□□ -1.88
CD48P09326 AP003467.2-201ENST00000520175 319 ntBASIC3.28□□□□□ -1.88
CD48P09326 AP000889.1-201ENST00000530968 660 ntBASIC3.28□□□□□ -1.88
CD48P09326 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.28□□□□□ -1.88
CD48P09326 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.28□□□□□ -1.88
CD48P09326 AL355812.1-201ENST00000603215 216 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC010680.3-201ENST00000604215 520 ntBASIC3.28□□□□□ -1.88
CD48P09326 AL359999.1-201ENST00000604513 294 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC091965.4-201ENST00000607691 587 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC069200.1-201ENST00000609511 323 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC008498.1-201ENST00000613012 531 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC068137.3-201ENST00000639191 341 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC099654.12-201ENST00000639868 649 ntBASIC3.28□□□□□ -1.88
CD48P09326 AC073869.6-201ENST00000640656 341 ntBASIC3.28□□□□□ -1.88
CD48P09326 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
CD48P09326 PABPC1P7-201ENST00000413177 1513 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms