Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.28□□□□□ -2.04
CD74P04233 RPS3AP43-201ENST00000479743 781 ntBASIC2.28□□□□□ -2.04
CD74P04233 RPL23AP70-201ENST00000483361 460 ntBASIC2.28□□□□□ -2.04
CD74P04233 RPL30P5-201ENST00000494923 336 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.28□□□□□ -2.04
CD74P04233 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.28□□□□□ -2.04
CD74P04233 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.28□□□□□ -2.04
CD74P04233 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.28□□□□□ -2.04
CD74P04233 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CD74P04233 OR5AK1P-201ENST00000524837 922 ntBASIC2.28□□□□□ -2.04
CD74P04233 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.28□□□□□ -2.04
CD74P04233 HSPE1P3-201ENST00000559254 309 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.28□□□□□ -2.04
CD74P04233 BNIP3P26-201ENST00000600827 554 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC131235.4-201ENST00000609288 620 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC245517.5-201ENST00000611529 162 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC026422.1-201ENST00000623961 452 ntBASIC2.28□□□□□ -2.04
CD74P04233 AC231657.1-201ENST00000624313 397 ntBASIC2.28□□□□□ -2.04
CD74P04233 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
CD74P04233 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.28□□□□□ -2.04
CD74P04233 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CD74P04233 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.28□□□□□ -2.05
CD74P04233 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CD74P04233 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CD74P04233 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CD74P04233 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.27□□□□□ -2.05
CD74P04233 RNU6-1155P-201ENST00000363554 107 ntBASIC2.27□□□□□ -2.05
CD74P04233 MIR135A2-201ENST00000384854 100 ntBASIC2.27□□□□□ -2.05
CD74P04233 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CD74P04233 RNU6-1197P-201ENST00000391183 107 ntBASIC2.27□□□□□ -2.05
CD74P04233 AL031679.1-201ENST00000400616 525 ntBASIC2.27□□□□□ -2.05
CD74P04233 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.27□□□□□ -2.05
CD74P04233 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.27□□□□□ -2.05
CD74P04233 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.27□□□□□ -2.05
CD74P04233 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.27□□□□□ -2.05
CD74P04233 ATP5F1P1-201ENST00000433775 569 ntBASIC2.27□□□□□ -2.05
CD74P04233 RPS12P2-201ENST00000439728 269 ntBASIC2.27□□□□□ -2.05
CD74P04233 AL031313.1-201ENST00000448435 256 ntBASIC2.27□□□□□ -2.05
CD74P04233 AL353691.1-201ENST00000451332 387 ntBASIC2.27□□□□□ -2.05
CD74P04233 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.27□□□□□ -2.05
CD74P04233 RPL18AP17-201ENST00000455326 198 ntBASIC2.27□□□□□ -2.05
CD74P04233 MTND1P16-201ENST00000465177 898 ntBASIC2.27□□□□□ -2.05
CD74P04233 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.27□□□□□ -2.05
CD74P04233 AC008716.1-201ENST00000511084 513 ntBASIC2.27□□□□□ -2.05
CD74P04233 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.27□□□□□ -2.05
CD74P04233 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CD74P04233 AP002404.1-201ENST00000532005 451 ntBASIC2.27□□□□□ -2.05
CD74P04233 SETP7-201ENST00000552169 453 ntBASIC2.27□□□□□ -2.05
CD74P04233 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.27□□□□□ -2.05
CD74P04233 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CD74P04233 AL512347.1-201ENST00000566420 503 ntBASIC2.27□□□□□ -2.05
CD74P04233 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.27□□□□□ -2.05
CD74P04233 AC103810.1-201ENST00000579873 453 ntBASIC2.27□□□□□ -2.05
CD74P04233 BNIP3P39-201ENST00000601077 554 ntBASIC2.27□□□□□ -2.05
CD74P04233 RNU4-5P-201ENST00000607255 135 ntBASIC2.27□□□□□ -2.05
CD74P04233 AC135507.2-201ENST00000612443 309 ntBASIC2.27□□□□□ -2.05
CD74P04233 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.27□□□□□ -2.05
CD74P04233 AC116618.1-201ENST00000634617 774 ntBASIC2.27□□□□□ -2.05
CD74P04233 CRYM-AS1-204ENST00000637983 556 ntBASIC2.27□□□□□ -2.05
CD74P04233 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CD74P04233 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CD74P04233 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.26□□□□□ -2.05
CD74P04233 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CD74P04233 SDAD1P2-201ENST00000441308 2028 ntBASIC2.26□□□□□ -2.05
CD74P04233 RNU6-560P-201ENST00000364007 108 ntBASIC2.26□□□□□ -2.05
CD74P04233 RNU4-68P-201ENST00000364314 141 ntBASIC2.26□□□□□ -2.05
CD74P04233 RNU6-198P-201ENST00000384258 104 ntBASIC2.26□□□□□ -2.05
CD74P04233 UBA52P6-201ENST00000399822 382 ntBASIC2.26□□□□□ -2.05
CD74P04233 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.26□□□□□ -2.05
CD74P04233 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.26□□□□□ -2.05
CD74P04233 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 AL139421.1-201ENST00000423010 169 ntBASIC2.26□□□□□ -2.05
CD74P04233 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.26□□□□□ -2.05
CD74P04233 AC092648.1-201ENST00000425870 423 ntBASIC2.26□□□□□ -2.05
CD74P04233 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.26□□□□□ -2.05
CD74P04233 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.26□□□□□ -2.05
CD74P04233 AL671855.1-201ENST00000446875 1203 ntBASIC2.26□□□□□ -2.05
CD74P04233 MTCO2P25-201ENST00000447065 681 ntBASIC2.26□□□□□ -2.05
CD74P04233 RSL24D1P3-201ENST00000449255 495 ntBASIC2.26□□□□□ -2.05
CD74P04233 AL009048.1-201ENST00000450437 298 ntBASIC2.26□□□□□ -2.05
CD74P04233 ZNF886P-201ENST00000450781 723 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC092155.2-201ENST00000454675 477 ntBASIC2.26□□□□□ -2.05
CD74P04233 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 RPS15AP34-201ENST00000487776 387 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC006445.1-201ENST00000491925 405 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 AC083906.5-201ENST00000503722 328 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC114981.1-201ENST00000503897 678 ntBASIC2.26□□□□□ -2.05
CD74P04233 UBE2V1P12-201ENST00000503954 474 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.26□□□□□ -2.05
CD74P04233 VN1R104P-201ENST00000505115 1009 ntBASIC2.26□□□□□ -2.05
CD74P04233 RPL37P25-201ENST00000507308 276 ntBASIC2.26□□□□□ -2.05
CD74P04233 SCGB1D5P-201ENST00000515134 247 ntBASIC2.26□□□□□ -2.05
CD74P04233 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CD74P04233 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.26□□□□□ -2.05
CD74P04233 HMGB1P6-201ENST00000569046 646 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms