Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX3O95343 AL159987.2-201ENST00000432754 307 ntBASIC3.21□□□□□ -1.9
SIX3O95343 TAAR7P-201ENST00000436141 242 ntBASIC3.21□□□□□ -1.9
SIX3O95343 ATP5C1P1-201ENST00000441945 895 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
SIX3O95343 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
SIX3O95343 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 AC118465.1-201ENST00000513820 1271 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC116347.2-201ENST00000514912 523 ntBASIC3.21□□□□□ -1.9
SIX3O95343 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.21□□□□□ -1.9
SIX3O95343 OR5G4P-201ENST00000525251 760 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.21□□□□□ -1.9
SIX3O95343 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX3O95343 AC007458.1-201ENST00000542812 373 ntBASIC3.21□□□□□ -1.9
SIX3O95343 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SIX3O95343 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.21□□□□□ -1.9
SIX3O95343 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX3O95343 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
SIX3O95343 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC093838.1-201ENST00000613014 469 ntBASIC3.21□□□□□ -1.9
SIX3O95343 AC013476.2-201ENST00000614456 459 ntBASIC3.21□□□□□ -1.9
SIX3O95343 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX3O95343 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
SIX3O95343 SNORA50A-202ENST00000629536 136 ntBASIC3.21□□□□□ -1.9
SIX3O95343 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIX3O95343 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
SIX3O95343 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX3O95343 AC005183.1-201ENST00000603687 1979 ntBASIC3.2□□□□□ -1.9
SIX3O95343 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
SIX3O95343 RNU6-660P-201ENST00000364566 109 ntBASIC3.2□□□□□ -1.9
SIX3O95343 U8.14-201ENST00000390843 143 ntBASIC3.2□□□□□ -1.9
SIX3O95343 SAR1AP2-201ENST00000392696 594 ntBASIC3.2□□□□□ -1.9
SIX3O95343 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
SIX3O95343 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX3O95343 VPS26BP1-201ENST00000417155 755 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.2□□□□□ -1.9
SIX3O95343 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.2□□□□□ -1.9
SIX3O95343 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.2□□□□□ -1.9
SIX3O95343 ELOCP30-201ENST00000447108 299 ntBASIC3.2□□□□□ -1.9
SIX3O95343 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX3O95343 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 HSPE1P23-201ENST00000509838 286 ntBASIC3.2□□□□□ -1.9
SIX3O95343 APOOP4-201ENST00000513530 597 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 AC002400.1-201ENST00000569310 726 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
SIX3O95343 AC013553.2-201ENST00000604244 589 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC112187.2-201ENST00000604345 283 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC063944.3-201ENST00000609969 533 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC013412.1-201ENST00000610687 192 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC135507.2-201ENST00000612443 309 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX3O95343 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
SIX3O95343 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC009159.2-201ENST00000617603 606 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC131159.1-201ENST00000621854 213 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
SIX3O95343 AC007671.2-201ENST00000637344 619 ntBASIC3.2□□□□□ -1.9
SIX3O95343 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIX3O95343 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SIX3O95343 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
SIX3O95343 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
SIX3O95343 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX3O95343 CD24P4-201ENST00000382840 243 ntBASIC3.19□□□□□ -1.9
SIX3O95343 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
SIX3O95343 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX3O95343 RN7SKP140-201ENST00000411196 284 ntBASIC3.19□□□□□ -1.9
SIX3O95343 RPL21P24-201ENST00000413752 448 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 MTCYBP3-201ENST00000445588 1137 ntBASIC3.19□□□□□ -1.9
SIX3O95343 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
SIX3O95343 ATG12P2-201ENST00000456830 416 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 RNU6-420P-201ENST00000458780 107 ntBASIC3.19□□□□□ -1.9
SIX3O95343 RNU7-59P-201ENST00000459101 61 ntBASIC3.19□□□□□ -1.9
SIX3O95343 snoU13.28-201ENST00000459235 104 ntBASIC3.19□□□□□ -1.9
SIX3O95343 RN7SL601P-201ENST00000471221 293 ntBASIC3.19□□□□□ -1.9
SIX3O95343 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms