Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH8O95206 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH8O95206 AC093027.1-201ENST00000546698 429 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH8O95206 AL352979.3-201ENST00000553515 247 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 SCOCP1-201ENST00000554676 349 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDH8O95206 AF038458.1-201ENST00000588406 262 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 AC016727.1-205ENST00000605437 569 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 AL442067.2-201ENST00000614033 363 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH8O95206 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDH8O95206 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH8O95206 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDH8O95206 MIR4275-201ENST00000636486 87 ntBASIC4.31□□□□□ -1.72
PCDH8O95206 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH8O95206 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH8O95206 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH8O95206 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH8O95206 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH8O95206 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PCDH8O95206 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH8O95206 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH8O95206 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH8O95206 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH8O95206 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH8O95206 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
PCDH8O95206 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH8O95206 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 RNU1-14P-201ENST00000362759 152 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 SNORA23-201ENST00000365128 182 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 RNU6-116P-201ENST00000384042 109 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 Y_RNA.460-201ENST00000384255 102 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 UBE2V1P2-201ENST00000397758 440 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 AC110754.1-201ENST00000399740 601 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 AL022722.2-201ENST00000402519 180 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 RPL7L1P10-201ENST00000427790 463 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH8O95206 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH8O95206 AL121871.1-201ENST00000443413 436 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH8O95206 MTCO3P9-201ENST00000506989 781 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 Y_RNA.691-201ENST00000516611 103 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 RN7SKP256-201ENST00000517201 314 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 RPL7P20-201ENST00000520308 745 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 ANP32BP3-201ENST00000559213 706 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 AL591034.3-201ENST00000605511 685 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 uc_338.34-201ENST00000617467 174 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 MIR8059-201ENST00000620427 81 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 AL353748.2-201ENST00000622148 471 ntBASIC4.3□□□□□ -1.72
PCDH8O95206 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH8O95206 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH8O95206 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH8O95206 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDH8O95206 MTND4P14-201ENST00000435799 1354 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PCDH8O95206 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDH8O95206 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 RNU6-946P-201ENST00000383878 107 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 SNORD96B-201ENST00000386148 79 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH8O95206 RNU4-46P-201ENST00000410818 138 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 BX323014.1-201ENST00000412876 237 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH8O95206 RPS23P10-201ENST00000416185 486 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 RPS12P23-201ENST00000419579 400 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 RPL7P46-201ENST00000425129 740 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 CYCSP43-201ENST00000438233 310 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH8O95206 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH8O95206 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
PCDH8O95206 S100A11P1-201ENST00000477525 312 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH8O95206 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AC104806.1-201ENST00000508720 308 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 TTC39CP1-201ENST00000512513 755 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH8O95206 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AL137161.1-201ENST00000532231 390 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH8O95206 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH8O95206 AC093012.1-202ENST00000549403 582 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH8O95206 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH8O95206 AL118558.2-201ENST00000556294 238 ntBASIC4.29□□□□□ -1.72
PCDH8O95206 BNIP3P5-201ENST00000562290 498 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms