Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TTC39CP1-201ENST00000512513 755 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.2□□□□□ -2.06
SGCEO43556 AP003066.2-201ENST00000529375 555 ntBASIC2.2□□□□□ -2.06
SGCEO43556 ISCA1P3-201ENST00000577104 373 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AL356280.1-201ENST00000603614 379 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.2□□□□□ -2.06
SGCEO43556 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
SGCEO43556 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SGCEO43556 AL450472.3-201ENST00000615578 367 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
SGCEO43556 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 CCT4P2-201ENST00000233836 1548 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
SGCEO43556 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 AC062016.1-201ENST00000355719 319 ntBASIC2.19□□□□□ -2.06
SGCEO43556 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SGCEO43556 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SGCEO43556 MIR27B-201ENST00000385129 97 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AL162578.1-201ENST00000406202 378 ntBASIC2.19□□□□□ -2.06
SGCEO43556 MTND3P20-201ENST00000407663 186 ntBASIC2.19□□□□□ -2.06
SGCEO43556 BX664727.1-201ENST00000416024 466 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
SGCEO43556 NUP35P1-201ENST00000422734 947 ntBASIC2.19□□□□□ -2.06
SGCEO43556 MTCO3P30-201ENST00000426425 670 ntBASIC2.19□□□□□ -2.06
SGCEO43556 COX6CP12-201ENST00000446748 202 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 MTND2P24-201ENST00000453434 806 ntBASIC2.19□□□□□ -2.06
SGCEO43556 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 MTCO3P11-201ENST00000455103 774 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 AC121161.1-201ENST00000510606 652 ntBASIC2.19□□□□□ -2.06
SGCEO43556 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
SGCEO43556 AP002748.2-201ENST00000528671 348 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.19□□□□□ -2.06
SGCEO43556 AC135507.1-201ENST00000607214 561 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AC080013.4-201ENST00000607624 649 ntBASIC2.19□□□□□ -2.06
SGCEO43556 MIR8084-201ENST00000614105 89 ntBASIC2.19□□□□□ -2.06
SGCEO43556 MIR6130-201ENST00000619419 109 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AC097460.3-201ENST00000623099 442 ntBASIC2.19□□□□□ -2.06
SGCEO43556 MIR7515-201ENST00000637837 67 ntBASIC2.19□□□□□ -2.06
SGCEO43556 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SGCEO43556 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
SGCEO43556 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SGCEO43556 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SGCEO43556 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SGCEO43556 RNA5SP456-201ENST00000364002 114 ntBASIC2.18□□□□□ -2.06
SGCEO43556 MIR506-201ENST00000384998 124 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RNU6-1300P-201ENST00000391046 108 ntBASIC2.18□□□□□ -2.06
SGCEO43556 NDUFB4P4-201ENST00000404822 243 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.18□□□□□ -2.06
SGCEO43556 RPS7P9-201ENST00000414704 586 ntBASIC2.18□□□□□ -2.06
SGCEO43556 MTND1P23-201ENST00000416931 372 ntBASIC2.18□□□□□ -2.06
SGCEO43556 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 MTCO2P17-201ENST00000424336 677 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC007742.1-201ENST00000425789 329 ntBASIC2.18□□□□□ -2.06
SGCEO43556 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 AL590233.1-201ENST00000430017 456 ntBASIC2.18□□□□□ -2.06
SGCEO43556 ELOCP26-201ENST00000436067 329 ntBASIC2.18□□□□□ -2.06
SGCEO43556 Z80107.1-201ENST00000436830 412 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AL049734.2-201ENST00000441066 616 ntBASIC2.18□□□□□ -2.06
SGCEO43556 DDX3P2-201ENST00000446138 111 ntBASIC2.18□□□□□ -2.06
SGCEO43556 SEPT14P24-201ENST00000447236 180 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RPL23AP45-201ENST00000476406 468 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RN7SL432P-201ENST00000484057 298 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AL049874.1-201ENST00000489560 388 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.18□□□□□ -2.06
SGCEO43556 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
SGCEO43556 RN7SKP24-201ENST00000515888 284 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RNU6-1256P-201ENST00000516539 103 ntBASIC2.18□□□□□ -2.06
SGCEO43556 SNORA31.22-201ENST00000517204 135 ntBASIC2.18□□□□□ -2.06
SGCEO43556 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SGCEO43556 OR5BN1P-201ENST00000532955 829 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 ZNF971P-201ENST00000562068 1249 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.18□□□□□ -2.06
SGCEO43556 AC023824.2-201ENST00000566185 400 ntBASIC2.18□□□□□ -2.06
SGCEO43556 RPL23AP84-201ENST00000571193 464 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC004853.1-201ENST00000604902 698 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC103710.4-201ENST00000609301 899 ntBASIC2.18□□□□□ -2.06
SGCEO43556 AC003001.2-201ENST00000616294 831 ntBASIC2.18□□□□□ -2.06
SGCEO43556 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SGCEO43556 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.17□□□□□ -2.06
SGCEO43556 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SGCEO43556 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SGCEO43556 SNORA38-201ENST00000363946 132 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AL592310.1-201ENST00000414330 671 ntBASIC2.17□□□□□ -2.06
SGCEO43556 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms