Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRDX3P3-201ENST00000447765 522 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AL031313.1-201ENST00000448435 256 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.81□□□□□ -1.96
RIPK2O43353 AC090525.1-201ENST00000479116 478 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.81□□□□□ -1.96
RIPK2O43353 LARP1BP2-201ENST00000486594 519 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC006445.1-201ENST00000491925 405 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RIPK2O43353 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.81□□□□□ -1.96
RIPK2O43353 AC114786.4-201ENST00000508771 728 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.81□□□□□ -1.96
RIPK2O43353 AC008716.1-201ENST00000511084 513 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MRPS36P2-201ENST00000512569 299 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC114797.1-201ENST00000514003 728 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.81□□□□□ -1.96
RIPK2O43353 AP001372.4-201ENST00000524889 472 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 PSMA2P1-201ENST00000526365 646 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RIPK2O43353 LRRC6P1-201ENST00000532188 885 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC090616.3-201ENST00000582184 217 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
RIPK2O43353 MIR3670-3-201ENST00000584855 65 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AC011471.1-201ENST00000585766 187 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.81□□□□□ -1.96
RIPK2O43353 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.81□□□□□ -1.96
RIPK2O43353 MIR3670-4-201ENST00000612260 65 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 AL050303.3-201ENST00000613704 284 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 CCT4P2-201ENST00000233836 1548 ntBASIC2.81□□□□□ -1.96
RIPK2O43353 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.81□□□□□ -1.96
RIPK2O43353 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.81□□□□□ -1.96
RIPK2O43353 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RIPK2O43353 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 AC006378.2-201ENST00000623178 2476 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.8□□□□□ -1.96
RIPK2O43353 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 AC109315.1-201ENST00000584143 1347 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 MAPK10-266ENST00000641066 6555 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 TAS2R15P-201ENST00000390674 928 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 U3.20-201ENST00000390909 217 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 MTND4P13-201ENST00000402078 1023 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 RPL18AP17-201ENST00000455326 198 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.8□□□□□ -1.96
RIPK2O43353 TBCAP3-201ENST00000512475 312 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AC006499.2-201ENST00000513470 337 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AC009812.2-201ENST00000517657 457 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AC022634.1-201ENST00000520765 532 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RIPK2O43353 MTCYBP23-201ENST00000558717 1102 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AC087465.1-201ENST00000560574 245 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.8□□□□□ -1.96
RIPK2O43353 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 RNU4-5P-201ENST00000607255 135 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 BX664608.1-201ENST00000610519 487 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 AL603758.1-201ENST00000618654 241 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.8□□□□□ -1.96
RIPK2O43353 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.8□□□□□ -1.96
RIPK2O43353 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RIPK2O43353 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIPK2O43353 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RIPK2O43353 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
RIPK2O43353 RNU6-1078P-201ENST00000364522 103 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 RN7SKP226-201ENST00000364912 300 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 SNORA72.3-201ENST00000365074 132 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 RNU6-637P-201ENST00000384050 107 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 PTMAP2-201ENST00000397627 327 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 RNU6-584P-201ENST00000410350 95 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.79□□□□□ -1.96
RIPK2O43353 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.79□□□□□ -1.96
RIPK2O43353 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.79□□□□□ -1.96
RIPK2O43353 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 CYCSP32-201ENST00000440548 321 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AL591503.2-201ENST00000442314 1005 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AL606517.1-201ENST00000446914 387 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.79□□□□□ -1.96
RIPK2O43353 RPS20P22-201ENST00000473700 357 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AC079203.1-201ENST00000487972 404 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 RN7SL504P-201ENST00000494496 287 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 XKRY-201ENST00000510392 1100 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.79□□□□□ -1.96
RIPK2O43353 RNU6-714P-201ENST00000516963 103 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 RNU6-840P-201ENST00000517275 65 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RIPK2O43353 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.79□□□□□ -1.96
RIPK2O43353 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.79□□□□□ -1.96
RIPK2O43353 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.79□□□□□ -1.96
RIPK2O43353 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
RIPK2O43353 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms