Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.57□□□□□ -2
CLOCKO15516 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.57□□□□□ -2
CLOCKO15516 AC060766.3-201ENST00000591442 263 ntBASIC2.57□□□□□ -2
CLOCKO15516 AL033523.1-201ENST00000605153 153 ntBASIC2.57□□□□□ -2
CLOCKO15516 AC024257.5-201ENST00000612739 531 ntBASIC2.57□□□□□ -2
CLOCKO15516 AC002550.2-201ENST00000621246 394 ntBASIC2.57□□□□□ -2
CLOCKO15516 AC109315.1-201ENST00000584143 1347 ntBASIC2.57□□□□□ -2
CLOCKO15516 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLOCKO15516 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
CLOCKO15516 SDAD1P2-201ENST00000441308 2028 ntBASIC2.56□□□□□ -2
CLOCKO15516 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.56□□□□□ -2
CLOCKO15516 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLOCKO15516 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLOCKO15516 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
CLOCKO15516 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
CLOCKO15516 SNORA36C-201ENST00000384289 132 ntBASIC2.56□□□□□ -2
CLOCKO15516 MIR325-201ENST00000385260 98 ntBASIC2.56□□□□□ -2
CLOCKO15516 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.56□□□□□ -2
CLOCKO15516 TPMTP2-201ENST00000414372 726 ntBASIC2.56□□□□□ -2
CLOCKO15516 AL513477.1-202ENST00000417061 214 ntBASIC2.56□□□□□ -2
CLOCKO15516 PPP1R11P2-201ENST00000423543 382 ntBASIC2.56□□□□□ -2
CLOCKO15516 RPL7P37-201ENST00000425095 738 ntBASIC2.56□□□□□ -2
CLOCKO15516 AL512844.2-201ENST00000433990 593 ntBASIC2.56□□□□□ -2
CLOCKO15516 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.56□□□□□ -2
CLOCKO15516 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
CLOCKO15516 RPS27P26-201ENST00000494583 239 ntBASIC2.56□□□□□ -2
CLOCKO15516 MTCYBP17-201ENST00000503579 789 ntBASIC2.56□□□□□ -2
CLOCKO15516 TTC39CP1-201ENST00000512513 755 ntBASIC2.56□□□□□ -2
CLOCKO15516 AC091826.1-201ENST00000514065 313 ntBASIC2.56□□□□□ -2
CLOCKO15516 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
CLOCKO15516 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.56□□□□□ -2
CLOCKO15516 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.56□□□□□ -2
CLOCKO15516 AC128657.1-201ENST00000549459 145 ntBASIC2.56□□□□□ -2
CLOCKO15516 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLOCKO15516 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
CLOCKO15516 AC068313.1-201ENST00000604028 1008 ntBASIC2.56□□□□□ -2
CLOCKO15516 RNU6-1192P-201ENST00000612197 107 ntBASIC2.56□□□□□ -2
CLOCKO15516 AC004852.3-201ENST00000614131 326 ntBASIC2.56□□□□□ -2
CLOCKO15516 RNU6-489P-201ENST00000618289 107 ntBASIC2.56□□□□□ -2
CLOCKO15516 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.56□□□□□ -2
CLOCKO15516 AC008443.7-201ENST00000622195 246 ntBASIC2.56□□□□□ -2
CLOCKO15516 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
CLOCKO15516 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLOCKO15516 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CLOCKO15516 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLOCKO15516 RNU1-105P-201ENST00000363470 161 ntBASIC2.55□□□□□ -2
CLOCKO15516 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLOCKO15516 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLOCKO15516 RNA5SP354-201ENST00000391247 136 ntBASIC2.55□□□□□ -2
CLOCKO15516 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC068533.2-201ENST00000411872 306 ntBASIC2.55□□□□□ -2
CLOCKO15516 Z85995.1-201ENST00000415547 335 ntBASIC2.55□□□□□ -2
CLOCKO15516 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.55□□□□□ -2
CLOCKO15516 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
CLOCKO15516 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.55□□□□□ -2
CLOCKO15516 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.55□□□□□ -2
CLOCKO15516 AL049641.1-201ENST00000441055 1948 ntBASIC2.55□□□□□ -2
CLOCKO15516 RNF2P1-201ENST00000442955 1010 ntBASIC2.55□□□□□ -2
CLOCKO15516 ARPC3P5-201ENST00000448802 534 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.55□□□□□ -2
CLOCKO15516 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
CLOCKO15516 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.55□□□□□ -2
CLOCKO15516 AC124947.2-202ENST00000552735 133 ntBASIC2.55□□□□□ -2
CLOCKO15516 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.55□□□□□ -2
CLOCKO15516 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.55□□□□□ -2
CLOCKO15516 AC090888.1-201ENST00000561335 1141 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.55□□□□□ -2
CLOCKO15516 AC024060.1-201ENST00000607052 494 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC024560.3-201ENST00000608482 349 ntBASIC2.55□□□□□ -2
CLOCKO15516 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
CLOCKO15516 AL357080.1-201ENST00000617394 239 ntBASIC2.55□□□□□ -2
CLOCKO15516 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC073308.1-201ENST00000623696 305 ntBASIC2.55□□□□□ -2
CLOCKO15516 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.55□□□□□ -2
CLOCKO15516 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
CLOCKO15516 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
CLOCKO15516 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLOCKO15516 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLOCKO15516 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.54□□□□□ -2
CLOCKO15516 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLOCKO15516 RNU6-1257P-201ENST00000384625 110 ntBASIC2.54□□□□□ -2
CLOCKO15516 ANAPC10P1-201ENST00000395991 556 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC009414.1-201ENST00000427200 443 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.54□□□□□ -2
CLOCKO15516 AL139132.1-201ENST00000431587 344 ntBASIC2.54□□□□□ -2
CLOCKO15516 RPS24P13-201ENST00000442520 397 ntBASIC2.54□□□□□ -2
CLOCKO15516 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC112653.1-201ENST00000443851 386 ntBASIC2.54□□□□□ -2
CLOCKO15516 RPL18AP17-201ENST00000455326 198 ntBASIC2.54□□□□□ -2
CLOCKO15516 snoU13.8-201ENST00000458890 104 ntBASIC2.54□□□□□ -2
CLOCKO15516 RNU7-23P-201ENST00000459465 62 ntBASIC2.54□□□□□ -2
CLOCKO15516 MTND4LP3-201ENST00000468320 276 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.54□□□□□ -2
CLOCKO15516 AC079203.1-201ENST00000487972 404 ntBASIC2.54□□□□□ -2
CLOCKO15516 RPS27P27-201ENST00000498779 255 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.54□□□□□ -2
CLOCKO15516 SUMO2P5-201ENST00000506790 245 ntBASIC2.54□□□□□ -2
CLOCKO15516 RPL23AP94-201ENST00000512518 302 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC006499.2-201ENST00000513470 337 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms