Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 AC073464.1-201ENST00000429823 534 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 RPL23AP30-201ENST00000432419 501 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 RBMX2P4-201ENST00000441256 376 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC140076.1-201ENST00000449897 361 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.09□□□□□ -1.75
FOXN3O00409 SNRPGP6-201ENST00000451124 220 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 RN7SL93P-201ENST00000463035 293 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 MTCO2P29-201ENST00000465212 189 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 VN1R17P-201ENST00000472048 1090 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC004924.1-201ENST00000480160 781 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN3O00409 AC007182.2-201ENST00000489251 402 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FOXN3O00409 RNU6-445P-201ENST00000516949 107 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC022695.1-201ENST00000522089 237 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXN3O00409 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 SUB1P2-201ENST00000556401 297 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN3O00409 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXN3O00409 AC092325.1-201ENST00000566449 554 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 MTCO3P24-201ENST00000572729 782 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC005951.2-201ENST00000576282 495 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 MIR4293-201ENST00000584305 78 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 AP001596.2-201ENST00000608410 312 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 AC103710.2-201ENST00000609912 942 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
FOXN3O00409 AC091905.1-201ENST00000624400 311 ntBASIC4.09□□□□□ -1.75
FOXN3O00409 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN3O00409 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXN3O00409 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXN3O00409 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
FOXN3O00409 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FOXN3O00409 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FOXN3O00409 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.76
FOXN3O00409 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FOXN3O00409 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN3O00409 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 RNU6-50P-201ENST00000362356 103 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AL136372.1-201ENST00000403060 228 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 RNU4-55P-201ENST00000410731 137 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC093106.2-201ENST00000428212 385 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 SETP5-201ENST00000437270 562 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 HSFY6P-201ENST00000445573 403 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC126182.1-201ENST00000478134 357 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AL049830.2-201ENST00000480072 201 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC108078.1-201ENST00000508073 725 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN3O00409 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 HMGB1P41-201ENST00000520234 440 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 FAM92A1P1-201ENST00000528023 890 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 PARP1P2-201ENST00000556806 195 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXN3O00409 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXN3O00409 AC138915.3-201ENST00000562908 1389 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN3O00409 TPRKBP2-201ENST00000565969 475 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 AL606834.2-201ENST00000602954 668 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AL606490.9-201ENST00000603331 271 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC106900.2-201ENST00000604994 317 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 SNORA62.6-201ENST00000606322 83 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC004696.1-201ENST00000614345 607 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 SNHG22-203ENST00000617833 660 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 AC136475.10-201ENST00000620253 385 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 AL157786.1-207ENST00000627771 695 ntBASIC4.08□□□□□ -1.76
FOXN3O00409 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXN3O00409 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN3O00409 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
FOXN3O00409 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC006504.1-201ENST00000562493 3666 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 RNA5SP295-201ENST00000362655 121 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 SNORA70.2-201ENST00000364506 135 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU5E-4P-201ENST00000364931 120 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU6-169P-201ENST00000365336 107 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNY3P14-201ENST00000384309 102 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 HSPE1P8-201ENST00000406997 288 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 BTF3P7-201ENST00000407097 488 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU2-71P-201ENST00000411395 189 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms