Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX39AO00148 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX39AO00148 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX39AO00148 DDX10P1-201ENST00000448545 1933 ntBASIC3.19□□□□□ -1.9
DDX39AO00148 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 RNU1-35P-201ENST00000362782 153 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 RNU4-92P-201ENST00000363783 136 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX39AO00148 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
DDX39AO00148 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 AC092648.1-201ENST00000425870 423 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.18□□□□□ -1.9
DDX39AO00148 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC092155.2-201ENST00000454675 477 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC134050.1-201ENST00000495088 933 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX39AO00148 RNA5SP356-201ENST00000515972 94 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 HMGN1P28-201ENST00000521340 364 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX39AO00148 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX39AO00148 RNU4-5P-201ENST00000607255 135 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC004852.3-201ENST00000614131 326 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC013476.2-201ENST00000614456 459 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 AC022306.3-201ENST00000619930 550 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX39AO00148 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
DDX39AO00148 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX39AO00148 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX39AO00148 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 RNU6-516P-201ENST00000411381 104 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX39AO00148 AL390023.1-201ENST00000428836 262 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 USP9YP24-201ENST00000434374 697 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 USP9YP17-201ENST00000444617 696 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX39AO00148 BMI1P1-201ENST00000445879 941 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 EEF1E1P1-201ENST00000446998 430 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX39AO00148 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX39AO00148 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX39AO00148 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX39AO00148 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC034105.3-201ENST00000565294 442 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC068135.2-201ENST00000569293 1028 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX39AO00148 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL136363.1-201ENST00000605349 337 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 ATP1B3P1-201ENST00000605365 821 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AC007619.2-201ENST00000605743 379 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 AL139022.2-201ENST00000606934 443 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC010608.3-201ENST00000625048 527 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX39AO00148 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
DDX39AO00148 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 AC022336.2-201ENST00000568966 2538 ntBASIC3.17□□□□□ -1.9
DDX39AO00148 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX39AO00148 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX39AO00148 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX39AO00148 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
DDX39AO00148 RNU1-112P-201ENST00000364401 164 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX39AO00148 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 RNU6-636P-201ENST00000384598 107 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 RNU6-925P-201ENST00000384629 104 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 MIR512-1-201ENST00000384913 84 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX39AO00148 NANOGP5-201ENST00000424456 877 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX39AO00148 UBE2V1P13-201ENST00000436983 439 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 CBWD4P-201ENST00000445695 655 ntBASIC3.16□□□□□ -1.9
DDX39AO00148 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX39AO00148 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms