Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 DUXAP11-201ENST00000603858 526 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 SEPT7P9-203ENST00000604116 343 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AC006329.2-201ENST00000611491 394 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL6A5A8TX70 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL6A5A8TX70 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 RNU2-37P-201ENST00000410695 177 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AL445687.1-201ENST00000439946 251 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC073901.1-201ENST00000462471 408 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AP000873.1-201ENST00000463987 400 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC104229.1-201ENST00000561364 255 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC083899.3-201ENST00000603413 594 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC011890.2-201ENST00000613393 294 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC083806.3-201ENST00000614016 455 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC004943.3-201ENST00000624116 600 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL6A5A8TX70 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC000111.3-201ENST00000433478 193 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC027673.1-201ENST00000456245 405 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 RNU6-717P-201ENST00000459076 104 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 HMGN1P28-201ENST00000521340 364 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC023050.2-201ENST00000544968 387 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A5A8TX70 AC090617.7-201ENST00000623952 126 ntBASIC1.16□□□□□ -2.22
COL6A5A8TX70 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL6A5A8TX70 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
COL6A5A8TX70 AC009541.1-201ENST00000438279 2662 ntBASIC1.15□□□□□ -2.22
COL6A5A8TX70 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 MTCO1P53-201ENST00000441633 699 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 MTCYBP18-201ENST00000501056 747 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 SUB1P4-201ENST00000566062 339 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 MZT1P2-201ENST00000604387 248 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 Y_RNA.571-201ENST00000384753 98 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 MCTS2P-201ENST00000394552 546 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 VN1R96P-201ENST00000446052 858 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 AC090071.1-201ENST00000507713 644 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.15□□□□□ -2.23
COL6A5A8TX70 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL6A5A8TX70 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL6A5A8TX70 AL133393.1-201ENST00000603277 287 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 AC092954.1-201ENST00000609121 445 ntBASIC1.15□□□□□ -2.23
COL6A5A8TX70 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.14□□□□□ -2.23
COL6A5A8TX70 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC011155.1-201ENST00000316512 456 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC092638.1-201ENST00000411966 1275 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 HMGB3P31-201ENST00000413333 595 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC233728.2-201ENST00000425348 757 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC013553.2-201ENST00000604244 589 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 KATNBL1P1-201ENST00000605192 748 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC104307.1-201ENST00000616142 196 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC010487.4-201ENST00000637027 61 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AL445669.1-201ENST00000426743 755 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 MTCYBP45-201ENST00000435243 565 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 MTCO3P44-201ENST00000510977 541 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 RNU6-113P-201ENST00000516653 101 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 AL159169.2-201ENST00000610061 1269 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 AL158801.5-201ENST00000623123 465 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 FO624990.1-201ENST00000636373 85 ntBASIC1.14□□□□□ -2.23
COL6A5A8TX70 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A5A8TX70 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
COL6A5A8TX70 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL6A5A8TX70 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
COL6A5A8TX70 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL6A5A8TX70 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A5A8TX70 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.13□□□□□ -2.23
COL6A5A8TX70 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.13□□□□□ -2.23
COL6A5A8TX70 AC104435.1-201ENST00000483483 166 ntBASIC1.13□□□□□ -2.23
COL6A5A8TX70 RNU6-56P-201ENST00000516986 93 ntBASIC1.13□□□□□ -2.23
COL6A5A8TX70 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms