Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 ARL5AP3-201ENST00000439327 386 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 RPS15AP27-201ENST00000449183 343 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 BX248409.1-201ENST00000455497 255 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 PNPLA4P1-201ENST00000458328 305 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 RPL23AP42-201ENST00000471152 471 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC055731.1-201ENST00000474387 401 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC018630.1-201ENST00000541376 925 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC074029.2-201ENST00000551045 634 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 MIR4287-201ENST00000579398 78 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC012254.4-201ENST00000588843 273 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 RNU6-670P-201ENST00000364312 104 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 RNU6-673P-201ENST00000365084 104 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 RNU6-761P-201ENST00000384148 107 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 U3.26-201ENST00000391236 204 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 PTGES3P2-201ENST00000407942 482 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 SNORA3.2-201ENST00000408221 125 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AL358453.1-201ENST00000422522 250 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 XKRYP1-201ENST00000423438 492 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AL445669.1-201ENST00000426743 755 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 XKRYP2-201ENST00000432915 492 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AL512661.1-201ENST00000434586 1253 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC107626.1-201ENST00000471084 183 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC017007.3-201ENST00000479865 435 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC092436.1-201ENST00000506450 503 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC103783.1-201ENST00000520506 373 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AP005902.1-201ENST00000521358 186 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC092470.1-201ENST00000546187 132 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 MED28P6-201ENST00000558776 231 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 EIF5A2P1-201ENST00000564027 460 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC011471.1-201ENST00000585766 187 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC007229.1-201ENST00000590455 412 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC040174.2-201ENST00000602701 465 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC002487.1-201ENST00000604565 994 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 HPVC1-201ENST00000629899 1198 ntBASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TCRBV3S1A0A5B6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 GSTA9P-201ENST00000406231 611 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 MIR1303-201ENST00000408625 86 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 NDUFB4P6-201ENST00000436819 366 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC087588.1-201ENST00000462203 316 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC111193.1-201ENST00000504097 155 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC020699.1-201ENST00000505161 445 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC109471.1-201ENST00000511631 612 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC117525.1-201ENST00000515228 503 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC087276.1-201ENST00000529659 480 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 DPRXP5-201ENST00000604662 539 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AL355297.2-201ENST00000604792 129 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC004908.2-201ENST00000609090 574 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 AC027309.3-201ENST00000623419 351 ntBASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
TCRBV3S1A0A5B6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 U8.14-201ENST00000390843 143 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 SNRPEP2-201ENST00000397592 279 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 RPS3AP24-201ENST00000407896 734 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 RNU6-712P-201ENST00000410558 100 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 HMGB3P31-201ENST00000413333 595 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 AC099677.1-201ENST00000420575 175 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 USP12PX-201ENST00000432383 1057 ntBASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.44□□□□□ -2.18
TCRBV3S1A0A5B6 RPL7P29-201ENST00000437151 728 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms