Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RLIMP1-201ENST00000339626 1680 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 MAPK10-304ENST00000641341 3984 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU1-14P-201ENST00000362759 152 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 SNORD3E-201ENST00000362899 217 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU6-61P-201ENST00000365528 109 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 MIR92A2-201ENST00000385299 75 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RPL21P65-201ENST00000406094 466 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC080125.1-201ENST00000414888 684 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 DPH3P2-201ENST00000422618 250 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RPL7P2-201ENST00000427639 268 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC016696.1-201ENST00000446949 318 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC113195.1-201ENST00000579952 141 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 PSMA6P4-201ENST00000603247 718 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC104695.3-201ENST00000604052 296 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL365434.2-201ENST00000607979 234 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 FAM27D1-201ENST00000612308 341 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 MIR6075-201ENST00000620782 95 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL732372.2-225ENST00000642124 456 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC006971.1-201ENST00000407916 4486 ntBASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC093849.1-201ENST00000563631 2209 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 Y_RNA.257-201ENST00000364596 102 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 SNORD82-201ENST00000365530 70 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU5E-6P-201ENST00000365574 115 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU6-328P-201ENST00000390887 106 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNA5SP36-201ENST00000410197 133 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU4-46P-201ENST00000410818 138 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL669831.1-202ENST00000428504 417 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 SUMO1P3-201ENST00000439961 304 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RPS24P13-201ENST00000442520 397 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL162388.1-201ENST00000450912 352 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RN7SL812P-201ENST00000493791 279 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC099522.1-202ENST00000514718 367 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 RNU6-1016P-201ENST00000516689 94 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC087854.1-201ENST00000519706 414 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AC018889.1-201ENST00000605372 397 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 FAM157A-202ENST00000615155 405 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 AL590099.1-201ENST00000615276 138 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 MIR6128-201ENST00000615528 109 ntBASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LOC102724428A0A0B4J2F2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LOC102724428A0A0B4J2F2 TPTE2P4-201ENST00000258589 1605 ntBASIC5.59□□□□□ -1.52
LOC102724428A0A0B4J2F2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LOC102724428A0A0B4J2F2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.59□□□□□ -1.52
LOC102724428A0A0B4J2F2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LOC102724428A0A0B4J2F2 AL133243.3-201ENST00000617415 3004 ntBASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
LOC102724428A0A0B4J2F2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms