Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.79□□□□□ -0.04
H2afb1S4R1E0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb1S4R1E0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gm715-201ENSMUST00000117865 831 ntBASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gm27463-201ENSMUST00000183569 57 ntBASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
H2afb1S4R1E0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1S4R1E0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1S4R1E0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.76□□□□□ -0.05
H2afb1S4R1E0 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms