Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Gm18958-201ENSMUST00000174258 762 ntBASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.67■□□□□ 0.26
Msh5Q9QUM7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.67■□□□□ 0.26
Msh5Q9QUM7 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh5Q9QUM7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Gm2274-201ENSMUST00000184539 609 ntBASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh5Q9QUM7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh5Q9QUM7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Msh5Q9QUM7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Msh5Q9QUM7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh5Q9QUM7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms