Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Gm11452-201ENSMUST00000122376 690 ntBASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Gm18195-201ENSMUST00000207604 706 ntBASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ripk4Q9ERK0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ripk4Q9ERK0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ripk4Q9ERK0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ripk4Q9ERK0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ripk4Q9ERK0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ripk4Q9ERK0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ripk4Q9ERK0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ripk4Q9ERK0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ripk4Q9ERK0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms