Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lonrf3Q9D4H7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lonrf3Q9D4H7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Gm13312-201ENSMUST00000119631 718 ntBASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lonrf3Q9D4H7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lonrf3Q9D4H7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms