Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34aQ99PP6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Gm15467-201ENSMUST00000120582 445 ntBASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Gm25925-201ENSMUST00000158314 306 ntBASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34aQ99PP6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim34aQ99PP6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.03■□□□□ 0.8
Trim34aQ99PP6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim34aQ99PP6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Gm7222-201ENSMUST00000117512 906 ntBASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim34aQ99PP6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Trim34aQ99PP6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Trim34aQ99PP6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Trim34aQ99PP6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim34aQ99PP6 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.02■□□□□ 0.79
Trim34aQ99PP6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gm13036-201ENSMUST00000117799 748 ntBASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gm12260-201ENSMUST00000122447 411 ntBASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim34aQ99PP6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Trim34aQ99PP6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20■□□□□ 0.79
Trim34aQ99PP6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Mir6404-201ENSMUST00000183699 94 ntBASIC20■□□□□ 0.79
Trim34aQ99PP6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20■□□□□ 0.79
Trim34aQ99PP6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20■□□□□ 0.79
Trim34aQ99PP6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim34aQ99PP6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim34aQ99PP6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms