Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Gm13186-201ENSMUST00000118031 316 ntBASIC14.25□□□□□ -0.13
Scrt1Q99M85 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.24□□□□□ -0.13
Scrt1Q99M85 Gm12350-201ENSMUST00000121208 462 ntBASIC14.24□□□□□ -0.13
Scrt1Q99M85 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Mir8112-201ENSMUST00000184382 131 ntBASIC14.24□□□□□ -0.13
Scrt1Q99M85 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.24□□□□□ -0.13
Scrt1Q99M85 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scrt1Q99M85 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gm13216-201ENSMUST00000117145 591 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gm27702-201ENSMUST00000184512 56 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gm5264-201ENSMUST00000190584 848 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.23□□□□□ -0.13
Scrt1Q99M85 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scrt1Q99M85 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gm11779-201ENSMUST00000118541 368 ntBASIC14.22□□□□□ -0.13
Scrt1Q99M85 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gm43575-201ENSMUST00000196420 516 ntBASIC14.22□□□□□ -0.13
Scrt1Q99M85 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.22□□□□□ -0.13
Scrt1Q99M85 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.22□□□□□ -0.13
Scrt1Q99M85 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms