Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb1Q91Y08 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb1Q91Y08 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Mir770-201ENSMUST00000103252 94 ntBASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb1Q91Y08 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms