Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhga3Q91XY5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Gm6433-201ENSMUST00000118634 875 ntBASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhga3Q91XY5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Gm7213-201ENSMUST00000215977 950 ntBASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhga3Q91XY5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Gm13186-201ENSMUST00000118031 316 ntBASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga3Q91XY5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Mir1668-201ENSMUST00000184114 107 ntBASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga3Q91XY5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms