Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Gm21362-201ENSMUST00000194272 928 ntBASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Gm7367-201ENSMUST00000057611 492 ntBASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga4Q91XY4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga4Q91XY4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga4Q91XY4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Gm11336-201ENSMUST00000118168 334 ntBASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Gm11950-201ENSMUST00000121615 838 ntBASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Gm29518-201ENSMUST00000190858 372 ntBASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga4Q91XY4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms