Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm13216-201ENSMUST00000117145 591 ntBASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm11594-201ENSMUST00000122313 162 ntBASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm27867-201ENSMUST00000184778 125 ntBASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44357-201ENSMUST00000195897 142 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm19658-201ENSMUST00000196231 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44367-201ENSMUST00000196836 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44350-201ENSMUST00000197197 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44390-201ENSMUST00000197533 144 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44313-201ENSMUST00000198018 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44486-201ENSMUST00000198508 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44454-201ENSMUST00000198541 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44314-201ENSMUST00000199263 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44394-201ENSMUST00000199558 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44484-201ENSMUST00000199873 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44466-201ENSMUST00000200264 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Gm44359-201ENSMUST00000200671 138 ntBASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgc5Q91XW9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgc5Q91XW9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Gm7862-201ENSMUST00000121461 292 ntBASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Gm1401-201ENSMUST00000122048 772 ntBASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.48■□□□□ 0.55
Pcdhgc5Q91XW9 Gm6376-201ENSMUST00000209407 580 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms