Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.93■□□□□ 0.3
Sh3d19Q91X43 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sh3d19Q91X43 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sh3d19Q91X43 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Mir6404-201ENSMUST00000183699 94 ntBASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3d19Q91X43 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3d19Q91X43 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3d19Q91X43 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3d19Q91X43 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sh3d19Q91X43 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms