Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chrna3Q8R4G9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.96■□□□□ 0.15
Chrna3Q8R4G9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Chrna3Q8R4G9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Gm17971-201ENSMUST00000190239 806 ntBASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chrna3Q8R4G9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chrna3Q8R4G9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chrna3Q8R4G9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Chrna3Q8R4G9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chrna3Q8R4G9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms