Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tm6sf2Q8R1J1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tm6sf2Q8R1J1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tm6sf2Q8R1J1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Gm13216-201ENSMUST00000117145 591 ntBASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tm6sf2Q8R1J1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Gm36967-201ENSMUST00000193814 266 ntBASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tm6sf2Q8R1J1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tm6sf2Q8R1J1 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Gm13312-201ENSMUST00000119631 718 ntBASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Tm6sf2Q8R1J1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms