Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Ddx54Q8K4L0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx54Q8K4L0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm11424-201ENSMUST00000121929 829 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm4518-201ENSMUST00000182638 718 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx54Q8K4L0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ddx54Q8K4L0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Gm13597-201ENSMUST00000121239 375 ntBASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx54Q8K4L0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms