Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.15■□□□□ 0.66
Shtn1Q8K2Q9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shtn1Q8K2Q9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shtn1Q8K2Q9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shtn1Q8K2Q9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Gm12497-201ENSMUST00000138778 237 ntBASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Shtn1Q8K2Q9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shtn1Q8K2Q9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shtn1Q8K2Q9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.11■□□□□ 0.65
Shtn1Q8K2Q9 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms