Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.13■□□□□ 0.33
Q8CD60 Gm33142-201ENSMUST00000193913 867 ntBASIC17.13■□□□□ 0.33
Q8CD60 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.13■□□□□ 0.33
Q8CD60 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Q8CD60 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.13■□□□□ 0.33
Q8CD60 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Q8CD60 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Q8CD60 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Q8CD60 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CD60 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q8CD60 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8CD60 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.12■□□□□ 0.33
Q8CD60 Gm15794-201ENSMUST00000120182 631 ntBASIC17.12■□□□□ 0.33
Q8CD60 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Gm45328-201ENSMUST00000210942 917 ntBASIC17.12■□□□□ 0.33
Q8CD60 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Q8CD60 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q8CD60 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.12■□□□□ 0.33
Q8CD60 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.12■□□□□ 0.33
Q8CD60 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CD60 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q8CD60 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Q8CD60 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.11■□□□□ 0.33
Q8CD60 Gm7284-201ENSMUST00000131667 944 ntBASIC17.11■□□□□ 0.33
Q8CD60 Gm10052-201ENSMUST00000168019 960 ntBASIC17.11■□□□□ 0.33
Q8CD60 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.11■□□□□ 0.33
Q8CD60 Gm7729-201ENSMUST00000050143 801 ntBASIC17.11■□□□□ 0.33
Q8CD60 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CD60 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Q8CD60 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8CD60 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q8CD60 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Q8CD60 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.1■□□□□ 0.33
Q8CD60 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Q8CD60 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q8CD60 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8CD60 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8CD60 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Q8CD60 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8CD60 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms