Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smco3Q8BQM7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Gm10138-203ENSMUST00000206952 366 ntBASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Gm5874-201ENSMUST00000096101 508 ntBASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smco3Q8BQM7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.46□□□□□ -0.26
Smco3Q8BQM7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Gm5408-201ENSMUST00000197998 747 ntBASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Smco3Q8BQM7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms