Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh19Q80TF3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Pcdh19Q80TF3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh19Q80TF3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh19Q80TF3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh19Q80TF3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Mzt1-203ENSMUST00000227948 952 ntBASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh19Q80TF3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Gm5864-201ENSMUST00000202263 970 ntBASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms