Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Gm29791-202ENSMUST00000207888 369 ntBASIC13.68□□□□□ -0.22
Rif1Q6PR54 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.68□□□□□ -0.22
Rif1Q6PR54 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Gm15427-201ENSMUST00000117288 531 ntBASIC13.67□□□□□ -0.22
Rif1Q6PR54 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.67□□□□□ -0.22
Rif1Q6PR54 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Gm3786-201ENSMUST00000202659 378 ntBASIC13.67□□□□□ -0.22
Rif1Q6PR54 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rif1Q6PR54 Gm25287-201ENSMUST00000103846 110 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm22918-201ENSMUST00000103855 110 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm8825-201ENSMUST00000182565 998 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 AY702102-202ENSMUST00000194651 1173 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm11478-201ENSMUST00000117851 599 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm17837-201ENSMUST00000186435 985 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Gm9172-201ENSMUST00000212092 954 ntBASIC13.66□□□□□ -0.22
Rif1Q6PR54 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rif1Q6PR54 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm14719-201ENSMUST00000121891 340 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms