Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Smarcd3Q6P9Z1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd3Q6P9Z1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd3Q6P9Z1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd3Q6P9Z1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd3Q6P9Z1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Smarcd3Q6P9Z1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Gm715-201ENSMUST00000117865 831 ntBASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Gm3375-201ENSMUST00000203929 796 ntBASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd3Q6P9Z1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms