Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Phf7-203ENSMUST00000226565 1971 ntBASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-3Q5R1C3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-3Q5R1C3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav3-3Q5R1C3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-3Q5R1C3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms