Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm4518-201ENSMUST00000182638 718 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Mir6404-201ENSMUST00000183699 94 ntBASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Gm27622-201ENSMUST00000183779 60 ntBASIC17.31■□□□□ 0.36
Col19a1Q0VF58 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col19a1Q0VF58 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Gm5177-201ENSMUST00000183092 997 ntBASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.3■□□□□ 0.36
Col19a1Q0VF58 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Col19a1Q0VF58 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col19a1Q0VF58 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.28■□□□□ 0.36
Col19a1Q0VF58 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Gm43125-201ENSMUST00000201724 730 ntBASIC17.28■□□□□ 0.36
Col19a1Q0VF58 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col19a1Q0VF58 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Col19a1Q0VF58 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col19a1Q0VF58 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms