Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Cdh6P97326 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdh6P97326 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh6P97326 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdh6P97326 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.51■□□□□ 0.23
Cdh6P97326 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdh6P97326 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.51■□□□□ 0.23
Cdh6P97326 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.51■□□□□ 0.23
Cdh6P97326 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh6P97326 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Cdh6P97326 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cdh6P97326 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Cdh6P97326 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdh6P97326 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cdh6P97326 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdh6P97326 Gm33142-201ENSMUST00000193913 867 ntBASIC16.5■□□□□ 0.23
Cdh6P97326 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cdh6P97326 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh6P97326 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.5■□□□□ 0.23
Cdh6P97326 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdh6P97326 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cdh6P97326 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.49■□□□□ 0.23
Cdh6P97326 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdh6P97326 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Cdh6P97326 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdh6P97326 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdh6P97326 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.49■□□□□ 0.23
Cdh6P97326 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh6P97326 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdh6P97326 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cdh6P97326 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdh6P97326 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdh6P97326 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh6P97326 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh6P97326 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh6P97326 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.48■□□□□ 0.23
Cdh6P97326 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.48■□□□□ 0.23
Cdh6P97326 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh6P97326 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh6P97326 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdh6P97326 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh6P97326 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh6P97326 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh6P97326 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh6P97326 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh6P97326 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms