Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sec61a1P61620 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sec61a1P61620 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.38□□□□□ -0.11
Sec61a1P61620 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.38□□□□□ -0.11
Sec61a1P61620 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sec61a1P61620 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a1P61620 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.38□□□□□ -0.11
Sec61a1P61620 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.37□□□□□ -0.11
Sec61a1P61620 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.37□□□□□ -0.11
Sec61a1P61620 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.37□□□□□ -0.11
Sec61a1P61620 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a1P61620 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a1P61620 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a1P61620 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm24841-201ENSMUST00000158676 357 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm10231-201ENSMUST00000181584 441 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm7977-201ENSMUST00000193787 748 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Gm10175-202ENSMUST00000208752 441 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sec61a1P61620 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.36□□□□□ -0.11
Sec61a1P61620 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a1P61620 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sec61a1P61620 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sec61a1P61620 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a1P61620 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sec61a1P61620 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.35□□□□□ -0.11
Sec61a1P61620 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.35□□□□□ -0.11
Sec61a1P61620 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sec61a1P61620 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a1P61620 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms