Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox3P53784 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sox3P53784 Gm11594-201ENSMUST00000122313 162 ntBASIC15.57■□□□□ 0.08
Sox3P53784 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox3P53784 Gm8000-201ENSMUST00000188378 592 ntBASIC15.57■□□□□ 0.08
Sox3P53784 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.57■□□□□ 0.08
Sox3P53784 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sox3P53784 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.57■□□□□ 0.08
Sox3P53784 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox3P53784 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sox3P53784 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Sox3P53784 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.56■□□□□ 0.08
Sox3P53784 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.56■□□□□ 0.08
Sox3P53784 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox3P53784 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Sox3P53784 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox3P53784 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox3P53784 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox3P53784 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox3P53784 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox3P53784 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox3P53784 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox3P53784 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.55■□□□□ 0.08
Sox3P53784 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox3P53784 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sox3P53784 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox3P53784 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.55■□□□□ 0.08
Sox3P53784 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox3P53784 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox3P53784 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sox3P53784 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox3P53784 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox3P53784 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox3P53784 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox3P53784 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.54■□□□□ 0.08
Sox3P53784 Gm2213-201ENSMUST00000197485 688 ntBASIC15.54■□□□□ 0.08
Sox3P53784 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox3P53784 Gm29791-202ENSMUST00000207888 369 ntBASIC15.54■□□□□ 0.08
Sox3P53784 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.54■□□□□ 0.08
Sox3P53784 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sox3P53784 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox3P53784 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox3P53784 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox3P53784 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms