Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pdx1P52946 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.13■□□□□ 0.17
Pdx1P52946 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.13■□□□□ 0.17
Pdx1P52946 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.13■□□□□ 0.17
Pdx1P52946 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pdx1P52946 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdx1P52946 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.12■□□□□ 0.17
Pdx1P52946 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.12■□□□□ 0.17
Pdx1P52946 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Pdx1P52946 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pdx1P52946 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pdx1P52946 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pdx1P52946 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdx1P52946 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pdx1P52946 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pdx1P52946 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.11■□□□□ 0.17
Pdx1P52946 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.11■□□□□ 0.17
Pdx1P52946 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pdx1P52946 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdx1P52946 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Pdx1P52946 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 Gm10052-201ENSMUST00000168019 960 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 Gm45328-201ENSMUST00000210942 917 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 Gm7729-201ENSMUST00000050143 801 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pdx1P52946 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.1■□□□□ 0.17
Pdx1P52946 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pdx1P52946 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdx1P52946 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pdx1P52946 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Pdx1P52946 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pdx1P52946 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms