Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Sox18P43680 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Mir3113-201ENSMUST00000175478 76 ntBASIC15.58■□□□□ 0.08
Sox18P43680 Gm7506-201ENSMUST00000207758 815 ntBASIC15.58■□□□□ 0.08
Sox18P43680 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.58■□□□□ 0.08
Sox18P43680 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.58■□□□□ 0.08
Sox18P43680 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sox18P43680 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Sox18P43680 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sox18P43680 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.58■□□□□ 0.08
Sox18P43680 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox18P43680 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox18P43680 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox18P43680 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Sox18P43680 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.57■□□□□ 0.08
Sox18P43680 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.57■□□□□ 0.08
Sox18P43680 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.57■□□□□ 0.08
Sox18P43680 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Gm19087-201ENSMUST00000191430 946 ntBASIC15.57■□□□□ 0.08
Sox18P43680 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.57■□□□□ 0.08
Sox18P43680 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.57■□□□□ 0.08
Sox18P43680 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.57■□□□□ 0.08
Sox18P43680 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox18P43680 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox18P43680 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox18P43680 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.56■□□□□ 0.08
Sox18P43680 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Mir8117-201ENSMUST00000184773 107 ntBASIC15.56■□□□□ 0.08
Sox18P43680 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.56■□□□□ 0.08
Sox18P43680 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Sox18P43680 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox18P43680 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox18P43680 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox18P43680 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.55■□□□□ 0.08
Sox18P43680 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms