Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Slc6a1P31648 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc6a1P31648 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slc6a1P31648 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Gm13158-201ENSMUST00000122007 736 ntBASIC14.05□□□□□ -0.16
Slc6a1P31648 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Gm27275-201ENSMUST00000184318 272 ntBASIC14.05□□□□□ -0.16
Slc6a1P31648 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.05□□□□□ -0.16
Slc6a1P31648 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc6a1P31648 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slc6a1P31648 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Slc6a1P31648 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Mir2861-201ENSMUST00000175539 82 ntBASIC14.04□□□□□ -0.16
Slc6a1P31648 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc6a1P31648 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc6a1P31648 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.03□□□□□ -0.16
Slc6a1P31648 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Slc6a1P31648 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a1P31648 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.02□□□□□ -0.16
Slc6a1P31648 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a1P31648 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.02□□□□□ -0.17
Slc6a1P31648 Gm15378-201ENSMUST00000121894 207 ntBASIC14.02□□□□□ -0.17
Slc6a1P31648 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms