Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.1■□□□□ 0.01
Capns1O88456 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.1■□□□□ 0.01
Capns1O88456 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.1■□□□□ 0.01
Capns1O88456 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.1■□□□□ 0.01
Capns1O88456 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capns1O88456 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Capns1O88456 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.09■□□□□ 0.01
Capns1O88456 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Capns1O88456 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Gm13559-201ENSMUST00000120476 863 ntBASIC15.09■□□□□ 0.01
Capns1O88456 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Gm30025-201ENSMUST00000218555 728 ntBASIC15.09■□□□□ 0.01
Capns1O88456 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.09■□□□□ 0.01
Capns1O88456 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.09■□□□□ 0.01
Capns1O88456 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Capns1O88456 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capns1O88456 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Capns1O88456 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Capns1O88456 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Capns1O88456 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Capns1O88456 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.08■□□□□ 0
Capns1O88456 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.08■□□□□ 0
Capns1O88456 Gm4974-201ENSMUST00000209974 875 ntBASIC15.08■□□□□ 0
Capns1O88456 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.08■□□□□ 0
Capns1O88456 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Capns1O88456 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Capns1O88456 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Capns1O88456 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Capns1O88456 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Capns1O88456 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Gm27741-201ENSMUST00000185060 237 ntBASIC15.07■□□□□ 0
Capns1O88456 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.07■□□□□ 0
Capns1O88456 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Capns1O88456 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Capns1O88456 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Capns1O88456 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Capns1O88456 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Capns1O88456 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Capns1O88456 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Capns1O88456 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.06■□□□□ 0
Capns1O88456 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms