Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.81■□□□□ 0.12
Cacna1hO88427 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cacna1hO88427 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1hO88427 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.81■□□□□ 0.12
Cacna1hO88427 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1hO88427 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.81■□□□□ 0.12
Cacna1hO88427 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.8■□□□□ 0.12
Cacna1hO88427 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gm18062-201ENSMUST00000208020 547 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 Gm18055-201ENSMUST00000208254 547 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1hO88427 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1hO88427 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cacna1hO88427 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.8■□□□□ 0.12
Cacna1hO88427 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22065-201ENSMUST00000103753 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22066-201ENSMUST00000103761 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24932-201ENSMUST00000103763 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24115-201ENSMUST00000103799 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22190-201ENSMUST00000103827 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22191-201ENSMUST00000103831 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24721-201ENSMUST00000103849 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm28018-201ENSMUST00000103869 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm26399-201ENSMUST00000103937 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25349-201ENSMUST00000177728 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm23616-201ENSMUST00000177797 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25871-201ENSMUST00000177816 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24752-201ENSMUST00000178240 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24496-201ENSMUST00000178287 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25649-201ENSMUST00000178476 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25548-201ENSMUST00000178681 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm23147-201ENSMUST00000178841 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm26095-201ENSMUST00000179270 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22171-201ENSMUST00000179283 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm23936-201ENSMUST00000179354 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm22619-201ENSMUST00000179516 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25255-201ENSMUST00000179579 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24755-201ENSMUST00000179691 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm26506-201ENSMUST00000179692 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm25086-201ENSMUST00000179931 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm23243-201ENSMUST00000180047 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24659-201ENSMUST00000180212 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm24169-201ENSMUST00000180244 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm23689-201ENSMUST00000180354 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm27359-201ENSMUST00000184153 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm27785-201ENSMUST00000184268 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm27466-201ENSMUST00000184396 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm27703-201ENSMUST00000184836 110 ntBASIC15.79■□□□□ 0.12
Cacna1hO88427 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.79■□□□□ 0.12
Cacna1hO88427 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1hO88427 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.78■□□□□ 0.12
Cacna1hO88427 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cacna1hO88427 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms