Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.04■□□□□ 0.96
Ubr1O70481 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Ubr1O70481 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.04■□□□□ 0.96
Ubr1O70481 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ubr1O70481 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubr1O70481 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubr1O70481 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ubr1O70481 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.03■□□□□ 0.96
Ubr1O70481 Gm17968-201ENSMUST00000194902 784 ntBASIC21.03■□□□□ 0.96
Ubr1O70481 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Ubr1O70481 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubr1O70481 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubr1O70481 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr1O70481 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Ubr1O70481 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21.02■□□□□ 0.96
Ubr1O70481 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21.02■□□□□ 0.96
Ubr1O70481 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 Gm45167-201ENSMUST00000208007 322 ntBASIC21.02■□□□□ 0.96
Ubr1O70481 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr1O70481 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.02■□□□□ 0.96
Ubr1O70481 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ubr1O70481 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ubr1O70481 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.01■□□□□ 0.95
Ubr1O70481 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
Ubr1O70481 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ubr1O70481 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC21.01■□□□□ 0.95
Ubr1O70481 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubr1O70481 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ubr1O70481 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Ubr1O70481 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Ubr1O70481 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21■□□□□ 0.95
Ubr1O70481 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21■□□□□ 0.95
Ubr1O70481 AC154572.2-201ENSMUST00000225105 997 ntBASIC21■□□□□ 0.95
Ubr1O70481 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21■□□□□ 0.95
Ubr1O70481 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ubr1O70481 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.99■□□□□ 0.95
Ubr1O70481 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.99■□□□□ 0.95
Ubr1O70481 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.99■□□□□ 0.95
Ubr1O70481 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.99■□□□□ 0.95
Ubr1O70481 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ubr1O70481 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ubr1O70481 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr1O70481 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.98■□□□□ 0.95
Ubr1O70481 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms