Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf13O54965 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf13O54965 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf13O54965 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf13O54965 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf13O54965 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf13O54965 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.79□□□□□ -0.04
Rnf13O54965 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Rnf13O54965 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf13O54965 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf13O54965 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf13O54965 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf13O54965 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf13O54965 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf13O54965 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf13O54965 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rnf13O54965 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf13O54965 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf13O54965 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.77□□□□□ -0.04
Rnf13O54965 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.77□□□□□ -0.04
Rnf13O54965 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Rnf13O54965 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf13O54965 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf13O54965 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Rnf13O54965 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rnf13O54965 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf13O54965 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rnf13O54965 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf13O54965 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Rnf13O54965 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rnf13O54965 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.76□□□□□ -0.05
Rnf13O54965 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Prob1-201ENSMUST00000097619 3021 ntBASIC14.76□□□□□ -0.05
Rnf13O54965 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.76□□□□□ -0.05
Rnf13O54965 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf13O54965 Gm7791-201ENSMUST00000219066 539 ntBASIC14.76□□□□□ -0.05
Rnf13O54965 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.76□□□□□ -0.05
Rnf13O54965 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms