Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ptch2O35595 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptch2O35595 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.67■□□□□ 0.26
Ptch2O35595 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.66■□□□□ 0.26
Ptch2O35595 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Gm25745-201ENSMUST00000174945 133 ntBASIC16.66■□□□□ 0.26
Ptch2O35595 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.66■□□□□ 0.26
Ptch2O35595 Gm7506-201ENSMUST00000207758 815 ntBASIC16.66■□□□□ 0.26
Ptch2O35595 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.66■□□□□ 0.26
Ptch2O35595 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ptch2O35595 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ptch2O35595 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ptch2O35595 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptch2O35595 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ptch2O35595 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ptch2O35595 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ptch2O35595 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ptch2O35595 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.65■□□□□ 0.26
Ptch2O35595 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.65■□□□□ 0.26
Ptch2O35595 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ptch2O35595 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptch2O35595 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ptch2O35595 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.64■□□□□ 0.25
Ptch2O35595 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Ptch2O35595 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ptch2O35595 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ptch2O35595 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.64■□□□□ 0.25
Ptch2O35595 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.64■□□□□ 0.25
Ptch2O35595 Gm18206-201ENSMUST00000207027 926 ntBASIC16.64■□□□□ 0.25
Ptch2O35595 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ptch2O35595 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.64■□□□□ 0.25
Ptch2O35595 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.64■□□□□ 0.25
Ptch2O35595 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.64■□□□□ 0.25
Ptch2O35595 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ptch2O35595 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptch2O35595 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ptch2O35595 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ptch2O35595 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ptch2O35595 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Ptch2O35595 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.63■□□□□ 0.25
Ptch2O35595 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.63■□□□□ 0.25
Ptch2O35595 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ptch2O35595 Gm5867-201ENSMUST00000063197 592 ntBASIC16.63■□□□□ 0.25
Ptch2O35595 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptch2O35595 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.63■□□□□ 0.25
Ptch2O35595 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms