Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3yl1O08641 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Gm37722-201ENSMUST00000193757 208 ntBASIC15.54■□□□□ 0.08
Sh3yl1O08641 Gm5587-201ENSMUST00000206270 674 ntBASIC15.54■□□□□ 0.08
Sh3yl1O08641 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3yl1O08641 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.54■□□□□ 0.08
Sh3yl1O08641 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.54■□□□□ 0.08
Sh3yl1O08641 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3yl1O08641 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.53■□□□□ 0.08
Sh3yl1O08641 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Gm13186-201ENSMUST00000118031 316 ntBASIC15.53■□□□□ 0.08
Sh3yl1O08641 Gm25016-201ENSMUST00000158399 131 ntBASIC15.53■□□□□ 0.08
Sh3yl1O08641 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.53■□□□□ 0.08
Sh3yl1O08641 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sh3yl1O08641 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.53■□□□□ 0.08
Sh3yl1O08641 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3yl1O08641 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.52■□□□□ 0.08
Sh3yl1O08641 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Gm9013-201ENSMUST00000132939 882 ntBASIC15.52■□□□□ 0.08
Sh3yl1O08641 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3yl1O08641 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3yl1O08641 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms