Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Gm5587-201ENSMUST00000206270 674 ntBASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-3J3QMG8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-3J3QMG8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-3J3QMG8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-3J3QMG8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm6623-201ENSMUST00000173570 544 ntBASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm6659-201ENSMUST00000174752 547 ntBASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm6345-202ENSMUST00000180900 204 ntBASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms