Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Gm5828-201ENSMUST00000071842 1860 ntBASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Gm38318-201ENSMUST00000195769 1706 ntBASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Gm37748-201ENSMUST00000194379 1140 ntBASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC25.6■■□□□ 1.69
Shroom2A2ALU4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom2A2ALU4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Gm11453-201ENSMUST00000117318 1007 ntBASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Gm14719-201ENSMUST00000121891 340 ntBASIC25.59■■□□□ 1.69
Shroom2A2ALU4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Gm38294-201ENSMUST00000192831 381 ntBASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom2A2ALU4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC25.58■■□□□ 1.69
Shroom2A2ALU4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Gm18489-201ENSMUST00000172565 551 ntBASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Gm27989-201ENSMUST00000184721 107 ntBASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shroom2A2ALU4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC25.58■■□□□ 1.68
Shroom2A2ALU4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC25.58■■□□□ 1.68
Shroom2A2ALU4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 Gm13453-201ENSMUST00000118708 357 ntBASIC25.57■■□□□ 1.68
Shroom2A2ALU4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC25.57■■□□□ 1.68
Shroom2A2ALU4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shroom2A2ALU4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Gm44855-201ENSMUST00000205725 362 ntBASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom2A2ALU4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Gm28631-201ENSMUST00000190740 334 ntBASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom2A2ALU4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Mir6404-201ENSMUST00000183699 94 ntBASIC25.54■■□□□ 1.68
Shroom2A2ALU4 AC132863.2-201ENSMUST00000226643 799 ntBASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shroom2A2ALU4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms